Chromosome 13


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Chromosome 13


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Band 13q11

chr13:17700000-18900000 (1200 Kb)

  • Chromosomal abnormalities in band 13q11
  • Genes in band 13q11 (reference hg38)
  • External links
  • References

    Chromosomal abnormalities in band 13q11

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST139804]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST152092]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST160390]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST165193]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST187241]pancreas__NScarcinoid-endocrine_tumour__NS[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST187241]pancreas__NScarcinoid-endocrine_tumour__NS[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST194785]bone__NSEwings_sarcoma-peripheral_primitive_neuroectodermal_tumour__NS[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST222106]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST27257]central_nervous_system__cerebellumprimitive_neuroectodermal_tumour-medulloblastoma__SHH_subtype  
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST27258]central_nervous_system__cerebellumprimitive_neuroectodermal_tumour-medulloblastoma__SHH_subtype  
    13q11 Cosmic_SVdel(13)(q11)  Cosmic_SV [COST466812]pancreas__NScarcinoma__NS[PubMed] 
    13q11 Mitelmandel(13)(q11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    13q1113q12dbCRIDdel(13)(q11q12)  10907Developmental Delay[PubMed] 
    13q1113q12Cosmic_SVdel(13)(q11q12)  Cosmic_SV [COST115032]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVdel(13)(q11q12)  Cosmic_SV [COST222375]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q14dbCRIDdel(13)(q11q14)  10642Chronic Lymphoblastic Leukemia[PubMed] 
    13q1113q14Mitelmandel(13)(q11q14)  Mitelman (CGAP) Acute erythroleukemia (FAB type M6)  
    13q1113q14Mitelmandel(13)(q11q14)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    13q1113q14Mitelmandel(13)(q11q14)  Mitelman (CGAP) Acute myeloblastic leukemia without maturation (FAB type M1)  
    13q1113q14Mitelmandel(13)(q11q14)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
    13q1113q14Mitelmandel(13)(q11q14)  Mitelman (CGAP) Chronic lymphocytic leukemia  
    13q1113q21Mitelmandel(13)(q11q21)  Mitelman (CGAP) Diffuse large B-cell lymphoma  
    13q1113q21Mitelmandel(13)(q11q21)  Mitelman (CGAP) Multiple myeloma  
    12p1113q11Mitelmander(12)t(12;13)(p11;q11)  Mitelman (CGAP) Acute erythroleukemia (FAB type M6)  
    12p1113q11Mitelmander(12)t(12;13)(p11;q11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    13q1117p11Mitelmander(17)t(13;17)(q11;p11)  Mitelman (CGAP) Chronic lymphocytic leukemia  
    3q2913q11Mitelmander(3)t(3;13)(q29;q11)  Mitelman (CGAP) Mantle cell lymphoma  
    13q11 Cosmic_SVdup(13)(q11)  Cosmic_SV [COST219181]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q11 Cosmic_SVdup(13)(q11)  Cosmic_SV [COST220131]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q11 Cosmic_SVdup(13)(q11)  Cosmic_SV [COST220132]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q11 Cosmic_SVdup(13)(q11)  Cosmic_SV [COST222294]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q11 Cosmic_SVdup(13)(q11)  Cosmic_SV [COST388389]pancreas__NScarcinoma__NS[PubMed] 
    13q11 Cosmic_SVdup(13)(q11)  Cosmic_SV [COST444765]pancreas__NScarcinoma__NS[PubMed] 
    13q1113q11Cosmic_SVdup(13)(q11q11)  Cosmic_SV [COST118417]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVdup(13)(q11q12)  Cosmic_SV [COST127735]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVdup(13)(q11q12)  Cosmic_SV [COST128512]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q21Cosmic_SVdup(13)(q11q21)  Cosmic_SV [COST122366]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVinv(13)(q11q11)  Cosmic_SV [COST119254]pancreas__NScarcinoid-endocrine_tumour__NS[PubMed] 
    13q1113q11Cosmic_SVinv(13)(q11q11)  Cosmic_SV [COST119254]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVinv(13)(q11q11)  Cosmic_SV [COST120751]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVinv(13)(q11q11)  Cosmic_SV [COST120924]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVinv(13)(q11q11)  Cosmic_SV [COST130643]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVinv(13)(q11q11)  Cosmic_SV [COST139621]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    13q1113q12Cosmic_SVinv(13)(q11q12)  Cosmic_SV [COST215249]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVinv(13)(q11q12)  Cosmic_SV [COST220133]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVinv(13)(q11q12)  Cosmic_SV [COST220134]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVinv(13)(q11q12)  Cosmic_SV [COST221730]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVinv(13)(q11q12)  Cosmic_SV [COST223340]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q33Cosmic_SVinv(13)(q11q33)  Cosmic_SV [COST225537]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q33Cosmic_SVinv(13)(q11q33)  Cosmic_SV [COST225538]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    12p1113q11Mitelmant(12;13)(p11;q11)  Mitelman (CGAP) Acute erythroleukemia (FAB type M6)  
    12p1113q11Mitelmant(12;13)(p11;q11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    13q1117p11Mitelmant(13;17)(q11;p11)  Mitelman (CGAP) Chronic lymphocytic leukemia  
    13q1120q12dbCRIDt(13;20)(q11;q12)  10705B-Cell Acute Lymphoblastic Leukemia[PubMed] 
    13q1122p11Mitelmant(13;22)(q11;p11)  Mitelman (CGAP)BreastAdenocarcinoma  
    3q2913q11Mitelmant(3;13)(q29;q11)  Mitelman (CGAP) Mantle cell lymphoma  
    8p1113q11dbCRIDt(8;13)(p11;q11)  11546Atypical Myeloproliferative Disorder[PubMed] 
    8p1113q11Mitelmant(8;13)(p11;q11)  Mitelman (CGAP) Chronic myeloproliferative disorder, NOS  
    10q2113q11Cosmic_SVu(10;13)(q21;q11)  Cosmic_SV [COST520167]lung__NScarcinoma__adenocarcinoma  
    11p1213q11Cosmic_SVu(11;13)(p12;q11)  Cosmic_SV [COST338063]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    11p1313q11Cosmic_SVu(11;13)(p13;q11)  Cosmic_SV [COST353652]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    11p1313q11Cosmic_SVu(11;13)(p13;q11)  Cosmic_SV [COST402630]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    1p1213q11Cosmic_SVu(1;13)(p12;q11)  Cosmic_SV [COST342286]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    1p1313q11Cosmic_SVu(1;13)(p13;q11)  Cosmic_SV [COST384359]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    12q1213q11Cosmic_SVu(12;13)(q12;q11)  Cosmic_SV [COST314730]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    12q1513q11Cosmic_SVu(12;13)(q15;q11)  Cosmic_SV [COST175240]central_nervous_system__brainglioma__astrocytoma_Grade_IV  
    13q1114q11Cosmic_SVu(13;14)(q11;q11)  Cosmic_SV [COST131244]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1115q11Cosmic_SVu(13;15)(q11;q11)  Cosmic_SV [COST328869]breast__NScarcinoma__ER-HER-positive_carcinoma[PubMed] 
    13q1115q14Cosmic_SVu(13;15)(q11;q14)  Cosmic_SV [COST343180]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1115q21Cosmic_SVu(13;15)(q11;q21)  Cosmic_SV [COST366042]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    13q1116p13Cosmic_SVu(13;16)(q11;p13)  Cosmic_SV [COST382004]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1117p12Cosmic_SVu(13;17)(q11;p12)  Cosmic_SV [COST353621]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1117q11Cosmic_SVu(13;17)(q11;q11)  Cosmic_SV [COST381780]breast__NScarcinoma__NS[PubMed] 
    13q1118p11Cosmic_SVu(13;18)(q11;p11)  Cosmic_SV [COST192992]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1118p11Cosmic_SVu(13;18)(q11;p11)  Cosmic_SV [COST569492]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1118p11Cosmic_SVu(13;18)(q11;p11)  Cosmic_SV [COST578487]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1118p11Cosmic_SVu(13;18)(q11;p11)  Cosmic_SV [COST720398]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1119q13Cosmic_SVu(13;19)(q11;q13)  Cosmic_SV [COST349022]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1120p13Cosmic_SVu(13;20)(q11;p13)  Cosmic_SV [COST403915]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1121p11Cosmic_SVu(13;21)(q11;p11)  Cosmic_SV [COST213663]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1121p11Cosmic_SVu(13;21)(q11;p11)  Cosmic_SV [COST366158]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1121p11Cosmic_SVu(13;21)(q11;p11)  Cosmic_SV [COST506040]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1121p11Cosmic_SVu(13;21)(q11;p11)  Cosmic_SV [COST562977]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q114p11Cosmic_SVu(13;4)(q11;p11)  Cosmic_SV [COST117571]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q114p15Cosmic_SVu(13;4)(q11;p15)  Cosmic_SV [COST728786]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q114p16Cosmic_SVu(13;4)(q11;p16)  Cosmic_SV [COST563559]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q116p22Cosmic_SVu(13;6)(q11;p22)  Cosmic_SV [COST564884]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q116p25Cosmic_SVu(13;6)(q11;p25)  Cosmic_SV [COST754828]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q119p21Cosmic_SVu(13;9)(q11;p21)  Cosmic_SV [COST346139]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST237677]bone__NSosteosarcoma__NS  
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST344555]NS__NSNS__NS[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST405475]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST465361]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST493114]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST499180]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST562409]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST564212]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST576953]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST731056]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST731251]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST741077]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST743234]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST744661]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113p13Cosmic_SVu(13)(q11;p13)  Cosmic_SV [COST758715]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST315815]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST348584]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST350982]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST352240]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST373822]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST375822]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST501133]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST721851]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST724916]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST735239]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST741549]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST762192]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q11Cosmic_SVu(13)(q11;q11)  Cosmic_SV [COST763339]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST322022]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST323138]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST332150]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST333269]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST333345]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST334341]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST355495]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST369588]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST383263]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST385797]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST403509]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST444955]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST503679]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST505167]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST507068]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST554285]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST562319]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST562617]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST568109]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST574032]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST727437]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST727908]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST763288]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST763435]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST770441]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q12Cosmic_SVu(13)(q11;q12)  Cosmic_SV [COST772632]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q13Cosmic_SVu(13)(q11;q13)  Cosmic_SV [COST385274]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q13Cosmic_SVu(13)(q11;q13)  Cosmic_SV [COST386995]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q13Cosmic_SVu(13)(q11;q13)  Cosmic_SV [COST722729]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q13Cosmic_SVu(13)(q11;q13)  Cosmic_SV [COST753257]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q14Cosmic_SVu(13)(q11;q14)  Cosmic_SV [COST495063]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    13q1113q21Cosmic_SVu(13)(q11;q21)  Cosmic_SV [COST316813]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q31Cosmic_SVu(13)(q11;q31)  Cosmic_SV [COST361509]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q1113q32Cosmic_SVu(13)(q11;q32)  Cosmic_SV [COST506337]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1113q33Cosmic_SVu(13)(q11;q33)  Cosmic_SV [COST755003]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    13q1413q11Cosmic_SVu(13)(q14;q11)  Cosmic_SV [COST750144]pancreas__NScarcinoma__NS[PubMed] 
    13q11Xp11Cosmic_SVu(13;X)(q11;p11)  Cosmic_SV [COST391411]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    13q11Xp21Cosmic_SVu(13;X)(q11;p21)  Cosmic_SV [COST382062]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    18p1113q11Cosmic_SVu(18;13)(p11;q11)  Cosmic_SV [COST555687]skin__NScarcinoma__NS[PubMed] 
    18p1113q11Cosmic_SVu(18;13)(p11;q11)  Cosmic_SV [COST570423]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    18p1113q11Cosmic_SVu(18;13)(p11;q11)  Cosmic_SV [COST572276]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    18p1113q11Cosmic_SVu(18;13)(p11;q11)  Cosmic_SV [COST737739]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    21p1113q11Cosmic_SVu(21;13)(p11;q11)  Cosmic_SV [COST148157]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    21p1113q11Cosmic_SVu(21;13)(p11;q11)  Cosmic_SV [COST154809]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    21p1113q11Cosmic_SVu(21;13)(p11;q11)  Cosmic_SV [COST580075]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    21p1113q11Cosmic_SVu(21;13)(p11;q11)  Cosmic_SV [COST759479]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    4p1513q11Cosmic_SVu(4;13)(p15;q11)  Cosmic_SV [COST750767]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    6p2213q11Cosmic_SVu(6;13)(p22;q11)  Cosmic_SV [COST353501]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    6p2213q11Cosmic_SVu(6;13)(p22;q11)  Cosmic_SV [COST369499]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    6p2213q11Cosmic_SVu(6;13)(p22;q11)  Cosmic_SV [COST565827]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    6p2413q11Cosmic_SVu(6;13)(p24;q11)  Cosmic_SV [COST405147]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    7p1113q11Cosmic_SVu(7;13)(p11;q11)  Cosmic_SV [COST348399]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    9p2113q11Cosmic_SVu(9;13)(p21;q11)  Cosmic_SV [COST213563]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    9q2213q11Cosmic_SVu(9;13)(q22;q11)  Cosmic_SV [COST130659]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 

    Genes in band 13q11

    (click on headers to reorder columns)
    GoldenPath hg38Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession
    chr13:18195297-18232016 + 13q11 20q13 Gene [CT]   FAM230C/ADNP FAM230C ADNP [ChiTaRS]       [Omim] [GenBank]
    chr13:18195297-18232016 + 13q11 1p13 Gene [CT]   IGSF3/FAM230C FAM230C IGSF3 [ChiTaRS]       [Omim] [GenBank]
    chr13:18195297-18232016 + 13q11   Gene [G]     FAM230C       [Omim] [Entrez]
    chr13:18738100-18740099 - 13q11   Gene [G]     LINC00417       [Omim] [Entrez]
    chr13:18811143-18871967 - 13q11   Gene [G]     ANKRD20A9P       [Omim] [Entrez]

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 [previous]   13 13p 13q 13p13 13p12 13p11 13q11 13q12 13q13 13q14 13q21 13q22 13q31 13q32 13q33 13q34   [next]

    External links

    Mitelman Database [NCI] : Breakpoint 13q11

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]
    Gene Expression (MSigDB) in 13q11  [ HTC ]  [ NCI ]  [ INV ]

    Global tables

  • Anomalies list (tabulated txt file)
  • Gene list (tabulated txt file)
  • list of gene fusions for each gene (with origins of the data)
  • list of gene fusions by origin (with topography and morphology)
  • References

  • [L] Fusion gene microarray reveals cancer type-specificity among fusion genes. Lovf M et al.Genes Chromosomes Cancer. 2011 May;50(5):348-57.   [PubMed 2011]
  • [S] A universal assay for detection of oncogenic fusion transcripts by oligo microarray analysis. Skotheim RI, et al. Mol Cancer. 2009 Jan 19;8:5.  [PubMed 21009]
  • [V] ETV6 fusion genes in hematological malignancies: A review. De Braekeleer E. et al. Leuk Res. 2012 May 12.   [PubMed 2012]
  • [GT] Cell Lines (Genentech)  [Pubmed 2015]   Nature Biotech Suppl.Table8
  • [FC] Fusion cancer (Beijing) [PubMed 2015] (the fusions are limited to class A and B)
  • [NOR] [PubMed 2016] Babiceanu M et al. Recurrent chimeric fusion RNAs in non-cancer tissues and cells. Nucleic Acids Res. 2016 Feb 2 (Table S3)
  • [URK][PubMed 2016] Urakami et al. Next generation sequencing approach for detecting 491 fusion genes from human cancer. Biomed Res. 2016;37(1):51-62.
  • [AM] [PubMed 2016] Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancersAlaei-Mahabadi B. et al.,Proc Natl Acad Sci U S A. 2016 Nov 16. pii: 201606220.
  • [FM] [PubMed 2018] Genomic hotspots but few recurrent fusion genes in breast cancer, Fimereli et al., Genes Chromosomes Cancer. (SupplTableS2.xls) 2018 Feb 13
  • [MA] [PubMed 2018] Pan-cancer genome and transcriptome analyses of1,699 paediatric leukaemias and solid tumours, Ma et al, Nature (March 2018) Table S3
  • [GAO] [PubMed 2018] Driver Fusions and Their Implications in the Development and Treatment of Human Cancers. Gao et al, Cell Reports (April 2018) Table S2
  • [MAY] [PubMed 2018] Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumor, Winters et al (July 2018) Table S7
  • FusionGDB: fusion gene annotation DataBase. Kim P t Zhou X. Nucleic Acids Res. 2019 Jan 8;47(D1):D994-D1004.[PubMed]site FusionGDB

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedjanv. 2019Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 13q11. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : https://atlasgeneticsoncology.usal.es/classic/Bands/13q11.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : mar. janv. 22 11:51:50 CET 2019

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