Chromosome 5


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ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome 5


[previous]   5 5p 5q 5p15 5p14 5p13 5p12 5p11 5q11 5q12 5q13 5q14 5q15 5q21 5q22 5q23 5q31 5q32 5q33 5q34 5q35   [next]

Arm 5q

chr5:48800000-181538259 (132738.259 Kb)

Chromosomal abnormalities in band 5q

(click on headers to reorder columns)
Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
5q Mitelmandel(5q)  Mitelman (CGAP) Acute erythroleukemia (FAB type M6)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute megakaryoblastic leukemia (FAB type M7)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute monoblastic leukemia (FAB type M5)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute monoblastic leukemia without differentiation (FAB type M5a)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute myeloblastic leukemia with maturation (FAB type M2)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute myeloblastic leukemia with minimal differentiation (FAB type M0)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute myeloblastic leukemia without maturation (FAB type M1)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute myelomonocytic leukemia (FAB type M4)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute promyelocytic leukemia (FAB type M3)  
5q Mitelmandel(5q)  Mitelman (CGAP) Acute undifferentiated leukemia  
5q Mitelmandel(5q)  Mitelman (CGAP) Adult T-cell lymphoma/leukemia (HTLV-1+)  
5q Mitelmandel(5q)  Mitelman (CGAP) Bilineage or biphenotypic leukemia  
5q Mitelmandel(5q)  Mitelman (CGAP)BladderTransitional cell carcinoma  
5q Mitelmandel(5q)  Mitelman (CGAP)BreastAdenocarcinoma  
5q Mitelmandel(5q)  Mitelman (CGAP) Chronic lymphocytic leukemia  
5q Mitelmandel(5q)  Mitelman (CGAP) Chronic myeloid leukemia, t(9;22)  
5q Mitelmandel(5q)  Mitelman (CGAP) Chronic myelomonocytic leukemia  
5q Mitelmandel(5q)  Mitelman (CGAP) Chronic myeloproliferative disorder, NOS  
5q Mitelmandel(5q)  Mitelman (CGAP) Dendritic cell neoplasm  
5q Mitelmandel(5q)  Mitelman (CGAP) Diffuse large B-cell lymphoma  
5q Mitelmandel(5q)  Mitelman (CGAP) Essential thrombocythemia  
5q Mitelmandel(5q)  Mitelman (CGAP) Follicular lymphoma  
5q Mitelmandel(5q)  Mitelman (CGAP) Hairy cell leukemia  
5q Mitelmandel(5q)  Mitelman (CGAP) Idiopathic myelofibrosis  
5q Mitelmandel(5q)  Mitelman (CGAP)Large intestineAdenocarcinoma  
5q Mitelmandel(5q)  Mitelman (CGAP) Mastocytosis  
5q Mitelmandel(5q)  Mitelman (CGAP) Mature T- and NK-cell neoplasm, NOS  
5q Mitelmandel(5q)  Mitelman (CGAP) Multiple myeloma  
5q Mitelmandel(5q)  Mitelman (CGAP) Mycosis fungoides/Szary syndrome  
5q Mitelmandel(5q)  Mitelman (CGAP) Myelodysplastic/myeloproliferative disease, NOS  
5q Mitelmandel(5q)  Mitelman (CGAP) Myelodysplastic syndrome, NOS  
5q Mitelmandel(5q)  Mitelman (CGAP) Nonneoplastic hematologic disorder/lesion  
5q Mitelmandel(5q)  Mitelman (CGAP)Oral cavitySquamous cell carcinoma  
5q Mitelmandel(5q)  Mitelman (CGAP)PleuraMesothelioma  
5q Mitelmandel(5q)  Mitelman (CGAP) Polycythemia vera  
5q Mitelmandel(5q)  Mitelman (CGAP) Refractory anemia  
5q Mitelmandel(5q)  Mitelman (CGAP) Refractory anemia with excess blasts-1  
5q Mitelmandel(5q)  Mitelman (CGAP) Refractory anemia with excess blasts-2  
5q Mitelmandel(5q)  Mitelman (CGAP) Refractory anemia with excess of blasts (FAB)  
5q Mitelmandel(5q)  Mitelman (CGAP) Refractory anemia with ringed sideroblasts  
5q Mitelmandel(5q)  Mitelman (CGAP) Refractory cytopenia with multilineage dysplasia  
5q Mitelmandel(5q)  Mitelman (CGAP)SkeletonEwing sarcoma  
5q Mitelmandel(5q)  Mitelman (CGAP) T-cell granular lymphocytic leukemia  
5q Mitelmandel(5q)  Mitelman (CGAP)TestisDiffuse large B-cell lymphoma  
5q Mitelmandel(5q)  Mitelman (CGAP)VaginaSquamous cell carcinoma  
[ Bold normal : A; Italic normal :G; Italic small : E ]

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 [previous]   5 5p 5q 5p15 5p14 5p13 5p12 5p11 5q11 5q12 5q13 5q14 5q15 5q21 5q22 5q23 5q31 5q32 5q33 5q34 5q35   [next]

References

  • [L] Fusion gene microarray reveals cancer type-specificity among fusion genes. Lovf M et al.Genes Chromosomes Cancer. 2011 May;50(5):348-57.   [PubMed 2011]
  • [S] A universal assay for detection of oncogenic fusion transcripts by oligo microarray analysis. Skotheim RI, et al. Mol Cancer. 2009 Jan 19;8:5.  [PubMed 21009]
  • [V] ETV6 fusion genes in hematological malignancies: A review. De Braekeleer E. et al. Leuk Res. 2012 May 12.   [PubMed 2012]
  • [GT] Cell Lines (Genentech)  [Pubmed 2015]   Nature Biotech Suppl.Table8
  • [FC] Fusion cancer (Beijing) [PubMed 2015] (the fusions are limited to class A and B)
  • [NOR] [PubMed 2016] Babiceanu M et al. Recurrent chimeric fusion RNAs in non-cancer tissues and cells. Nucleic Acids Res. 2016 Feb 2 (Table S3)
  • [URK][PubMed 2016] Urakami et al. Next generation sequencing approach for detecting 491 fusion genes from human cancer. Biomed Res. 2016;37(1):51-62.
  • [AM] [PubMed 2016] Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancersAlaei-Mahabadi B. et al.,Proc Natl Acad Sci U S A. 2016 Nov 16. pii: 201606220.
  • [FM] [PubMed 2018] Genomic hotspots but few recurrent fusion genes in breast cancer, Fimereli et al., Genes Chromosomes Cancer. (SupplTableS2.xls) 2018 Feb 13
  • [MA] [PubMed 2018] Pan-cancer genome and transcriptome analyses of1,699 paediatric leukaemias and solid tumours, Ma et al, Nature (March 2018) Table S3
  • [GAO] [PubMed 2018] Driver Fusions and Their Implications in the Development and Treatment of Human Cancers. Gao et al, Cell Reports (April 2018) Table S2
  • [MAY] [PubMed 2018] Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumor, Winters et al (July 2018) Table S7
  • FusionGDB: fusion gene annotation DataBase. Kim P t Zhou X. Nucleic Acids Res. 2019 Jan 8;47(D1):D994-D1004.[PubMed]site FusionGDB

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedjanv. 2019Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 5q. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : https://atlasgeneticsoncology.usal.es/classic/Bands/5q.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : mar. janv. 22 11:45:32 CET 2019

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