Chromosome 6


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ENTITIES: by Chromosome band

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Chromosome 6


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Arm 6q

chr6:59800000-170805979 (111005.979 Kb)

Chromosomal abnormalities in band 6q

(click on headers to reorder columns)
Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
6q Mitelmandel(6q)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Acute megakaryoblastic leukemia (FAB type M7)  
6q Mitelmandel(6q)  Mitelman (CGAP) Acute myeloblastic leukemia without maturation (FAB type M1)  
6q Mitelmandel(6q)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
6q Mitelmandel(6q)  Mitelman (CGAP) Adult T-cell lymphoma/leukemia (HTLV-1+)  
6q Mitelmandel(6q)  Mitelman (CGAP) Bilineage or biphenotypic leukemia  
6q Mitelmandel(6q)  Mitelman (CGAP)BrainAstrocytoma, grade III-IV/Glioblastoma  
6q Mitelmandel(6q)  Mitelman (CGAP)BrainMeningioma  
6q Mitelmandel(6q)  Mitelman (CGAP)BreastAdenocarcinoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Burkitt lymphoma/leukemia  
6q Mitelmandel(6q)  Mitelman (CGAP) Chronic lymphocytic leukemia  
6q Mitelmandel(6q)  Mitelman (CGAP) Chronic myeloid leukemia, t(9;22)  
6q Mitelmandel(6q)  Mitelman (CGAP) Diffuse large B-cell lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Extranodal NK/T-cell lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP)EyeMalignant melanoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Follicular lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP)LungAdenocarcinoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Mantle cell lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Mature B-cell neoplasm, NOS  
6q Mitelmandel(6q)  Mitelman (CGAP) Mature T- and NK-cell neoplasm, NOS  
6q Mitelmandel(6q)  Mitelman (CGAP) Multiple myeloma  
6q Mitelmandel(6q)  Mitelman (CGAP) Myelodysplastic syndrome, NOS  
6q Mitelmandel(6q)  Mitelman (CGAP) Nodal marginal zone B-cell lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP) Nonneoplastic hematologic disorder/lesion  
6q Mitelmandel(6q)  Mitelman (CGAP) Peripheral T-cell lymphoma, unspecified  
6q Mitelmandel(6q)  Mitelman (CGAP) Refractory anemia  
6q Mitelmandel(6q)  Mitelman (CGAP) Refractory anemia with excess of blasts (FAB)  
6q Mitelmandel(6q)  Mitelman (CGAP) Splenic marginal zone B-cell lymphoma  
6q Mitelmandel(6q)  Mitelman (CGAP) T-cell granular lymphocytic leukemia  
6q Mitelmandel(6q)  Mitelman (CGAP)TestisSeminoma/Dysgerminoma  
6q Mitelmandel(6q)  Mitelman (CGAP)TongueSquamous cell carcinoma  
[ Bold normal : A; Italic normal :G; Italic small : E ]

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References

  • [L] Fusion gene microarray reveals cancer type-specificity among fusion genes. Lovf M et al.Genes Chromosomes Cancer. 2011 May;50(5):348-57.   [PubMed 2011]
  • [S] A universal assay for detection of oncogenic fusion transcripts by oligo microarray analysis. Skotheim RI, et al. Mol Cancer. 2009 Jan 19;8:5.  [PubMed 21009]
  • [V] ETV6 fusion genes in hematological malignancies: A review. De Braekeleer E. et al. Leuk Res. 2012 May 12.   [PubMed 2012]
  • [GT] Cell Lines (Genentech)  [Pubmed 2015]   Nature Biotech Suppl.Table8
  • [FC] Fusion cancer (Beijing) [PubMed 2015] (the fusions are limited to class A and B)
  • [NOR] [PubMed 2016] Babiceanu M et al. Recurrent chimeric fusion RNAs in non-cancer tissues and cells. Nucleic Acids Res. 2016 Feb 2 (Table S3)
  • [URK][PubMed 2016] Urakami et al. Next generation sequencing approach for detecting 491 fusion genes from human cancer. Biomed Res. 2016;37(1):51-62.
  • [AM] [PubMed 2016] Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancersAlaei-Mahabadi B. et al.,Proc Natl Acad Sci U S A. 2016 Nov 16. pii: 201606220.
  • [FM] [PubMed 2018] Genomic hotspots but few recurrent fusion genes in breast cancer, Fimereli et al., Genes Chromosomes Cancer. (SupplTableS2.xls) 2018 Feb 13
  • [MA] [PubMed 2018] Pan-cancer genome and transcriptome analyses of1,699 paediatric leukaemias and solid tumours, Ma et al, Nature (March 2018) Table S3
  • [GAO] [PubMed 2018] Driver Fusions and Their Implications in the Development and Treatment of Human Cancers. Gao et al, Cell Reports (April 2018) Table S2
  • [MAY] [PubMed 2018] Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumor, Winters et al (July 2018) Table S7
  • FusionGDB: fusion gene annotation DataBase. Kim P t Zhou X. Nucleic Acids Res. 2019 Jan 8;47(D1):D994-D1004.[PubMed]site FusionGDB

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedjanv. 2019Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 6q. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : https://atlasgeneticsoncology.usal.es/classic/Bands/6q.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : mar. janv. 22 11:46:25 CET 2019

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