BUB1B-PAK6 (BUB1B-PAK6 readthrough)

1. Identity

Other alias
General Information
HGNC (Hugo) BUB1B-PAK6
LocusID (NCBI) 106821730
Atlas_Id 77811
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 40217428 and ends at 40277487 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)BUB1B-PAK6   52276
Cards
Entrez_Gene (NCBI)BUB1B-PAK6  106821730  BUB1B-PAK6 readthrough
Aliases
GeneCards (Weizmann)BUB1B-PAK6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View] &nbsp [Sequence]  chr15:40217428-40277487 [Contig_View]  BUB1B-PAK6 [Vega]
TCGA cBioPortalBUB1B-PAK6
AceView (NCBI)BUB1B-PAK6
Genatlas (Paris)BUB1B-PAK6
WikiGenes106821730
SOURCE (Princeton)BUB1B-PAK6
Genetics Home Reference (NIH)BUB1B-PAK6
Genomic and cartography
GoldenPath hg38 (UCSC)BUB1B-PAK6  -     chr15:40217428-40277487 +  15q15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BUB1B-PAK6  -     15q15.1   [Description]    (hg19-Feb_2009)
EnsemblBUB1B-PAK6 - 15q15.1 [CytoView hg19]  BUB1B-PAK6 - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBIBUB1B-PAK6 [Mapview hg19]  BUB1B-PAK6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK290227 AK315813 AK315817
RefSeq transcript (Entrez)NM_001128628 NM_001128629
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BUB1B-PAK6
Cluster EST : UnigeneHs.732375 [ NCBI ]
CGAP (NCI)Hs.732375
Gene ExpressionBUB1B-PAK6 [ NCBI-GEO ]   BUB1B-PAK6 [ EBI - ARRAY_EXPRESS ]   BUB1B-PAK6 [ SEEK ]   BUB1B-PAK6 [ MEM ]
Gene Expression Viewer (FireBrowse)BUB1B-PAK6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)106821730
GTEX Portal (Tissue expression)BUB1B-PAK6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BUB1B-PAK6
DMDM Disease mutations106821730
Blocks (Seattle)BUB1B-PAK6
Protein Interaction databases
BioGRIDBUB1B-PAK6
STRING (EMBL)BUB1B-PAK6
ZODIACBUB1B-PAK6
Ontologies - Pathways
Huge Navigator BUB1B-PAK6 [HugePedia]
snp3D : Map Gene to Disease106821730
BioCentury BCIQBUB1B-PAK6
ClinGenBUB1B-PAK6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106821730
Clinical trialBUB1B-PAK6
Miscellaneous
canSAR (ICR)BUB1B-PAK6 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBUB1B-PAK6
EVEXBUB1B-PAK6
GoPubMedBUB1B-PAK6
iHOPBUB1B-PAK6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:37:11 CEST 2018

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