CORO7-PAM16 (CORO7-PAM16 readthrough)

1. Identity

Other alias
General Information
HGNC (Hugo) CORO7-PAM16
LocusID (NCBI) 100529144
Atlas_Id 62034
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 4340251 and ends at 4416961 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CORO7-PAM16 (16p13.3) / LOX (5q23.1)CORO7-PAM16 (16p13.3) / MLLT4-AS1 (6q27)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)CORO7-PAM16   44424
Cards
Entrez_Gene (NCBI)CORO7-PAM16  100529144  CORO7-PAM16 readthrough
Aliases
GeneCards (Weizmann)CORO7-PAM16
Ensembl hg19 (Hinxton)ENSG00000103426 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103426 [Gene_View] &nbspENSG00000103426 [Sequence]  chr16:4340251-4416961 [Contig_View]  CORO7-PAM16 [Vega]
ICGC DataPortalENSG00000103426
TCGA cBioPortalCORO7-PAM16
AceView (NCBI)CORO7-PAM16
Genatlas (Paris)CORO7-PAM16
WikiGenes100529144
SOURCE (Princeton)CORO7-PAM16
Genetics Home Reference (NIH)CORO7-PAM16
Genomic and cartography
GoldenPath hg38 (UCSC)CORO7-PAM16  -     chr16:4340251-4416961 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CORO7-PAM16  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblCORO7-PAM16 - 16p13.3 [CytoView hg19]  CORO7-PAM16 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBICORO7-PAM16 [Mapview hg19]  CORO7-PAM16 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL833954 BC032732
RefSeq transcript (Entrez)NM_001201479
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187608
Consensus coding sequences : CCDS (NCBI)CORO7-PAM16
Cluster EST : UnigeneHs.437957 [ NCBI ]
CGAP (NCI)Hs.437957
Alternative Splicing GalleryENSG00000103426
Gene ExpressionCORO7-PAM16 [ NCBI-GEO ]   CORO7-PAM16 [ EBI - ARRAY_EXPRESS ]   CORO7-PAM16 [ SEEK ]   CORO7-PAM16 [ MEM ]
Gene Expression Viewer (FireBrowse)CORO7-PAM16 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100529144
GTEX Portal (Tissue expression)CORO7-PAM16
Human Protein AtlasENSG00000103426-CORO7-PAM16 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CORO7-PAM16
DMDM Disease mutations100529144
Blocks (Seattle)CORO7-PAM16
Human Protein Atlas [tissue]ENSG00000103426-CORO7-PAM16 [tissue]
IPIIPI00985452   
Protein Interaction databases
FunCoupENSG00000103426
BioGRIDCORO7-PAM16
STRING (EMBL)CORO7-PAM16
ZODIACCORO7-PAM16
Ontologies - Pathways
Huge Navigator CORO7-PAM16 [HugePedia]
snp3D : Map Gene to Disease100529144
BioCentury BCIQCORO7-PAM16
ClinGenCORO7-PAM16
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100529144
Clinical trialCORO7-PAM16
Miscellaneous
canSAR (ICR)CORO7-PAM16 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCORO7-PAM16
EVEXCORO7-PAM16
GoPubMedCORO7-PAM16
iHOPCORO7-PAM16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:41:17 CEST 2018

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