DPH6-AS1 (DPH6 antisense RNA 1 (head to head))

1. Identity

Alias_names
General Information
ATPBD4 antisense RNA 1 (non-protein coding)
ATPBD4 antisense RNA 1
ATPBD4 antisense RNA 1 (head to head)
Other alias
HGNC (Hugo) DPH6-AS1
LocusID (NCBI) 100507466
Atlas_Id 62610
Location 15q14  [Link to chromosome band 15q14]
Location_base_pair Starts at 35546195 and ends at 35859001 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)DPH6-AS1   44147
Cards
Entrez_Gene (NCBI)DPH6-AS1  100507466  DPH6 antisense RNA 1 (head to head)
AliasesATPBD4-AS1
GeneCards (Weizmann)DPH6-AS1
Ensembl hg19 (Hinxton)ENSG00000248079 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248079 [Gene_View] &nbspENSG00000248079 [Sequence]  chr15:35546195-35859001 [Contig_View]  DPH6-AS1 [Vega]
ICGC DataPortalENSG00000248079
TCGA cBioPortalDPH6-AS1
AceView (NCBI)DPH6-AS1
Genatlas (Paris)DPH6-AS1
WikiGenes100507466
SOURCE (Princeton)DPH6-AS1
Genetics Home Reference (NIH)DPH6-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)DPH6-AS1  -     chr15:35546195-35859001 +  15q14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DPH6-AS1  -     15q14   [Description]    (hg19-Feb_2009)
EnsemblDPH6-AS1 - 15q14 [CytoView hg19]  DPH6-AS1 - 15q14 [CytoView hg38]
Mapping of homologs : NCBIDPH6-AS1 [Mapview hg19]  DPH6-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC025664
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DPH6-AS1
Cluster EST : UnigeneHs.536420 [ NCBI ]
CGAP (NCI)Hs.536420
Alternative Splicing GalleryENSG00000248079
Gene ExpressionDPH6-AS1 [ NCBI-GEO ]   DPH6-AS1 [ EBI - ARRAY_EXPRESS ]   DPH6-AS1 [ SEEK ]   DPH6-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)DPH6-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100507466
GTEX Portal (Tissue expression)DPH6-AS1
Human Protein AtlasENSG00000248079-DPH6-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DPH6-AS1
DMDM Disease mutations100507466
Blocks (Seattle)DPH6-AS1
Human Protein Atlas [tissue]ENSG00000248079-DPH6-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000248079
BioGRIDDPH6-AS1
STRING (EMBL)DPH6-AS1
ZODIACDPH6-AS1
Ontologies - Pathways
Huge Navigator DPH6-AS1 [HugePedia]
snp3D : Map Gene to Disease100507466
BioCentury BCIQDPH6-AS1
ClinGenDPH6-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507466
Clinical trialDPH6-AS1
Miscellaneous
canSAR (ICR)DPH6-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPH6-AS1
EVEXDPH6-AS1
GoPubMedDPH6-AS1
iHOPDPH6-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:43:11 CEST 2018

For comments and suggestions or contributions, please contact us atlasgeneticsoncology@usal.es.