GPR50-AS1 (GPR50 antisense RNA 1)

1. Identity

Alias_names
General Information
Other alias-
HGNC (Hugo) GPR50-AS1
LocusID (NCBI) 100128688
Atlas_Id 78243
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 151175198 and ends at 151177836 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)GPR50-AS1   40259
Cards
Entrez_Gene (NCBI)GPR50-AS1  100128688  GPR50 antisense RNA 1
Aliases
GeneCards (Weizmann)GPR50-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View] &nbsp [Sequence]  chrX:151175198-151177836 [Contig_View]  GPR50-AS1 [Vega]
TCGA cBioPortalGPR50-AS1
AceView (NCBI)GPR50-AS1
Genatlas (Paris)GPR50-AS1
WikiGenes100128688
SOURCE (Princeton)GPR50-AS1
Genetics Home Reference (NIH)GPR50-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)GPR50-AS1  -     chrX:151175198-151177836 -  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR50-AS1  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblGPR50-AS1 - Xq28 [CytoView hg19]  GPR50-AS1 - Xq28 [CytoView hg38]
Mapping of homologs : NCBIGPR50-AS1 [Mapview hg19]  GPR50-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX324422 BX343514
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR50-AS1
Cluster EST : UnigeneHs.624904 [ NCBI ]
CGAP (NCI)Hs.624904
Gene ExpressionGPR50-AS1 [ NCBI-GEO ]   GPR50-AS1 [ EBI - ARRAY_EXPRESS ]   GPR50-AS1 [ SEEK ]   GPR50-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR50-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100128688
GTEX Portal (Tissue expression)GPR50-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GPR50-AS1
DMDM Disease mutations100128688
Blocks (Seattle)GPR50-AS1
IPIIPI00984668   
Protein Interaction databases
BioGRIDGPR50-AS1
STRING (EMBL)GPR50-AS1
ZODIACGPR50-AS1
Ontologies - Pathways
Huge Navigator GPR50-AS1 [HugePedia]
snp3D : Map Gene to Disease100128688
BioCentury BCIQGPR50-AS1
ClinGenGPR50-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100128688
Clinical trialGPR50-AS1
Miscellaneous
canSAR (ICR)GPR50-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR50-AS1
EVEXGPR50-AS1
GoPubMedGPR50-AS1
iHOPGPR50-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:47:55 CEST 2018

For comments and suggestions or contributions, please contact us atlasgeneticsoncology@usal.es.