IPO11-LRRC70 (IPO11-LRRC70 readthrough)

1. Identity

Other alias
General Information
HGNC (Hugo) -
LocusID (NCBI) 101180901
Atlas_Id 64637
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 62578735 and ends at 62628589 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)IPO11-LRRC70  101180901  IPO11-LRRC70 readthrough
Aliases
GeneCards (Weizmann)IPO11-LRRC70
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View] &nbsp [Sequence]  chr5:62578735-62628589 [Contig_View]  IPO11-LRRC70 [Vega]
TCGA cBioPortalIPO11-LRRC70
AceView (NCBI)IPO11-LRRC70
Genatlas (Paris)IPO11-LRRC70
WikiGenes101180901
SOURCE (Princeton)IPO11-LRRC70
Genetics Home Reference (NIH)IPO11-LRRC70
Genomic and cartography
GoldenPath hg38 (UCSC)IPO11-LRRC70  -     chr5:62578735-62628589 +  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IPO11-LRRC70  -     5q12.1   [Description]    (hg19-Feb_2009)
EnsemblIPO11-LRRC70 - 5q12.1 [CytoView hg19]  IPO11-LRRC70 - 5q12.1 [CytoView hg38]
Mapping of homologs : NCBIIPO11-LRRC70 [Mapview hg19]  IPO11-LRRC70 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IPO11-LRRC70
Cluster EST : UnigeneHs.482269 [ NCBI ]
CGAP (NCI)Hs.482269
Gene ExpressionIPO11-LRRC70 [ NCBI-GEO ]   IPO11-LRRC70 [ EBI - ARRAY_EXPRESS ]   IPO11-LRRC70 [ SEEK ]   IPO11-LRRC70 [ MEM ]
Gene Expression Viewer (FireBrowse)IPO11-LRRC70 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)101180901
GTEX Portal (Tissue expression)IPO11-LRRC70
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IPO11-LRRC70
DMDM Disease mutations101180901
Blocks (Seattle)IPO11-LRRC70
Protein Interaction databases
BioGRIDIPO11-LRRC70
STRING (EMBL)IPO11-LRRC70
ZODIACIPO11-LRRC70
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101180901
BioCentury BCIQIPO11-LRRC70
ClinGenIPO11-LRRC70
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101180901
Clinical trialIPO11-LRRC70
Miscellaneous
canSAR (ICR)IPO11-LRRC70 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIPO11-LRRC70
EVEXIPO11-LRRC70
GoPubMedIPO11-LRRC70
iHOPIPO11-LRRC70
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:50:03 CEST 2018

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