MIR1909 (microRNA 1909)

1. Identity

Alias_names
General Information
Alias_symbol (synonym)hsa-mir-1909
Other aliasmir-1909
HGNC (Hugo) MIR1909
LocusID (NCBI) 100302210
Atlas_Id 55933
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 1816159 and ends at 1816238 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)MIR1909   35393
Cards
Entrez_Gene (NCBI)MIR1909  100302210  microRNA 1909
AliasesMIRN1909; hsa-mir-1909; mir-1909
GeneCards (Weizmann)MIR1909
Ensembl hg19 (Hinxton)ENSG00000284216 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284216 [Gene_View] &nbspENSG00000284216 [Sequence]  chr19:1816159-1816238 [Contig_View]  MIR1909 [Vega]
ICGC DataPortalENSG00000284216
TCGA cBioPortalMIR1909
AceView (NCBI)MIR1909
Genatlas (Paris)MIR1909
WikiGenes100302210
SOURCE (Princeton)MIR1909
Genetics Home Reference (NIH)MIR1909
miRBaseMIR1909
dbDEMCMIR1909
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1909  -     chr19:1816159-1816238 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1909  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblMIR1909 - 19p13.3 [CytoView hg19]  MIR1909 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIMIR1909 [Mapview hg19]  MIR1909 [Mapview hg38]
OMIM615201   
Gene and transcription
Genbank (Entrez)LM610377
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1909
Alternative Splicing GalleryENSG00000284216
Gene ExpressionMIR1909 [ NCBI-GEO ]   MIR1909 [ EBI - ARRAY_EXPRESS ]   MIR1909 [ SEEK ]   MIR1909 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1909 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100302210
GTEX Portal (Tissue expression)MIR1909
Human Protein AtlasENSG00000284216-MIR1909 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1909
DMDM Disease mutations100302210
Blocks (Seattle)MIR1909
Human Protein Atlas [tissue]ENSG00000284216-MIR1909 [tissue]
Protein Interaction databases
FunCoupENSG00000284216
BioGRIDMIR1909
STRING (EMBL)MIR1909
ZODIACMIR1909
Ontologies - Pathways
Huge Navigator MIR1909 [HugePedia]
snp3D : Map Gene to Disease100302210
BioCentury BCIQMIR1909
ClinGenMIR1909
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302210
Chemical/Pharm GKB GenePA164722541
Clinical trialMIR1909
Miscellaneous
canSAR (ICR)MIR1909 (select the gene name)
DataMed IndexMIR1909
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1909
EVEXMIR1909
GoPubMedMIR1909
iHOPMIR1909
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 17 18:23:45 CET 2019

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