MKL2 (-)

1. Identity

Alias_names
General Information
Alias_symbol (synonym)MRTF-B
FLJ31823
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 57496
Atlas_Id 49970
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
C11orf95 (11q13.1) / MKL2 (16p13.12)LCN2 (9q34.11) / MKL2 (16p13.12)MKL2 (16p13.12) / CACNA1H (16p13.3)
MKL2 (16p13.12) / FRMD4A (10p13)MKL2 (16p13.12) / FSTL3 (19p13.3)MKL2 (16p13.12) / PPP6R3 (11q13.2)
MKL2 (16p13.12) / RBFOX1 (16p13.3)MKL2 (16p13.12) / SCNN1B (16p12.2)MKL2 (16p13.12) / SNX29 (16p13.13)
MKL2 (16p13.12) / ZNF200 (16p13.3)USP31 (16p12.2) / MKL2 (16p13.12)MKL2 16p13.12 / CACNA1H 16p13.3
MKL2 16p13.12 / FRMD4A 10p13MKL2 16p13.12 / FSTL3 19p13.3MKL2 16p13.12 / RBFOX1 16p13.3
MKL2 16p13.12 RUNDC2AMKL2 16p13.12 / SCNN1B 16p12.2MKL2 16p13.12 / ZNF200 16p13.3
USP31 16p12.2 / MKL2 16p13.12

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 10 ]
  Soft Tissues: Lipoma: Chondroid lipoma
Soft tissue tumors: an overview
t(10;16)(p13;p13) MKL2/FRMD4A
t(16;16)(p12;p13) MKL2/SCNN1B
t(16;16)(p12;p13) USP31/MKL2
MKL2/CACNA1H (16p13)
MKL2/RBFOX1 (16p13)
MKL2/SNX29 (16p13)
MKL2/ZNF200 (16p13)
t(16;19)(p13;p13) MKL2/FSTL3


3. External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)MKL2  57496  -
Aliases
GeneCards (Weizmann)MKL2
Ensembl hg19 (Hinxton)ENSG00000186260 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186260 [Gene_View] &nbspENSG00000186260 [Sequence]  - [Contig_View]  MKL2 [Vega]
ICGC DataPortalENSG00000186260
TCGA cBioPortalMKL2
AceView (NCBI)MKL2
Genatlas (Paris)MKL2
WikiGenes57496
SOURCE (Princeton)MKL2
Genetics Home Reference (NIH)MKL2
Genomic and cartography
GoldenPath hg38 (UCSC)MKL2  -  
GoldenPath hg19 (UCSC)MKL2  -  
EnsemblMKL2 - [CytoView hg19]  MKL2 - [CytoView hg38]
Mapping of homologs : NCBIMKL2 [Mapview hg19]  MKL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MKL2
Alternative Splicing GalleryENSG00000186260
Gene ExpressionMKL2 [ NCBI-GEO ]   MKL2 [ EBI - ARRAY_EXPRESS ]   MKL2 [ SEEK ]   MKL2 [ MEM ]
Gene Expression Viewer (FireBrowse)MKL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)57496
GTEX Portal (Tissue expression)MKL2
Human Protein AtlasENSG00000186260-MKL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MKL2
DMDM Disease mutations57496
Blocks (Seattle)MKL2
Human Protein Atlas [tissue]ENSG00000186260-MKL2 [tissue]
HPRD17577
Protein Interaction databases
FunCoupENSG00000186260
BioGRIDMKL2
STRING (EMBL)MKL2
ZODIACMKL2
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease57496
BioCentury BCIQMKL2
ClinGenMKL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57496
Clinical trialMKL2
Miscellaneous
canSAR (ICR)MKL2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineMKL2
EVEXMKL2
GoPubMedMKL2
iHOPMKL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 27 11:38:13 CEST 2018

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