SNAR-A10 (small ILF3/NF90-associated RNA A10)

1. Identity

Alias_symbol (synonym)
General Information
Other alias-
HGNC (Hugo) SNAR-A10
LocusID (NCBI) 100170216
Atlas_Id 73608
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 47923779 and ends at 47923899 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)SNAR-A10   34313
Cards
Entrez_Gene (NCBI)SNAR-A10  100170216  small ILF3/NF90-associated RNA A10
Aliases
GeneCards (Weizmann)SNAR-A10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View] &nbsp [Sequence]  chr19:47923779-47923899 [Contig_View]  SNAR-A10 [Vega]
TCGA cBioPortalSNAR-A10
AceView (NCBI)SNAR-A10
Genatlas (Paris)SNAR-A10
WikiGenes100170216
SOURCE (Princeton)SNAR-A10
Genetics Home Reference (NIH)SNAR-A10
Genomic and cartography
GoldenPath hg38 (UCSC)SNAR-A10  -     chr19:47923779-47923899 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNAR-A10  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblSNAR-A10 - 19q13.33 [CytoView hg19]  SNAR-A10 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBISNAR-A10 [Mapview hg19]  SNAR-A10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNAR-A10
Cluster EST : UnigeneHs.723094 [ NCBI ]
CGAP (NCI)Hs.723094
Gene ExpressionSNAR-A10 [ NCBI-GEO ]   SNAR-A10 [ EBI - ARRAY_EXPRESS ]   SNAR-A10 [ SEEK ]   SNAR-A10 [ MEM ]
Gene Expression Viewer (FireBrowse)SNAR-A10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100170216
GTEX Portal (Tissue expression)SNAR-A10
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNAR-A10
DMDM Disease mutations100170216
Blocks (Seattle)SNAR-A10
Protein Interaction databases
BioGRIDSNAR-A10
STRING (EMBL)SNAR-A10
ZODIACSNAR-A10
Ontologies - Pathways
Huge Navigator SNAR-A10 [HugePedia]
snp3D : Map Gene to Disease100170216
BioCentury BCIQSNAR-A10
ClinGenSNAR-A10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100170216
Chemical/Pharm GKB GenePA162404026
Clinical trialSNAR-A10
Miscellaneous
canSAR (ICR)SNAR-A10 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNAR-A10
EVEXSNAR-A10
GoPubMedSNAR-A10
iHOPSNAR-A10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:30:11 CEST 2018

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