SNORD105B (small nucleolar RNA, C/D box 105B)

1. Identity

Other alias
General Information
HGNC (Hugo) SNORD105B
LocusID (NCBI) 100113382
Atlas_Id 57455
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 10109749 and ends at 10109840 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)SNORD105B   33572
Cards
Entrez_Gene (NCBI)SNORD105B  100113382  small nucleolar RNA, C/D box 105B
Aliases
GeneCards (Weizmann)SNORD105B
Ensembl hg19 (Hinxton)ENSG00000238531 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238531 [Gene_View] &nbspENSG00000238531 [Sequence]  chr19:10109749-10109840 [Contig_View]  SNORD105B [Vega]
ICGC DataPortalENSG00000238531
TCGA cBioPortalSNORD105B
AceView (NCBI)SNORD105B
Genatlas (Paris)SNORD105B
WikiGenes100113382
SOURCE (Princeton)SNORD105B
Genetics Home Reference (NIH)SNORD105B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD105B  -     chr19:10109749-10109840 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD105B  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD105B - 19p13.2 [CytoView hg19]  SNORD105B - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBISNORD105B [Mapview hg19]  SNORD105B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD105B
Alternative Splicing GalleryENSG00000238531
Gene ExpressionSNORD105B [ NCBI-GEO ]   SNORD105B [ EBI - ARRAY_EXPRESS ]   SNORD105B [ SEEK ]   SNORD105B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD105B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100113382
GTEX Portal (Tissue expression)SNORD105B
Human Protein AtlasENSG00000238531-SNORD105B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD105B
DMDM Disease mutations100113382
Blocks (Seattle)SNORD105B
Human Protein Atlas [tissue]ENSG00000238531-SNORD105B [tissue]
Protein Interaction databases
FunCoupENSG00000238531
BioGRIDSNORD105B
STRING (EMBL)SNORD105B
ZODIACSNORD105B
Ontologies - Pathways
Huge Navigator SNORD105B [HugePedia]
snp3D : Map Gene to Disease100113382
BioCentury BCIQSNORD105B
ClinGenSNORD105B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100113382
Chemical/Pharm GKB GenePA162404169
Clinical trialSNORD105B
Miscellaneous
canSAR (ICR)SNORD105B (select the gene name)
DataMed IndexSNORD105B
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD105B
EVEXSNORD105B
GoPubMedSNORD105B
iHOPSNORD105B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 17 18:39:25 CET 2019

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