SNORD116-14 (small nucleolar RNA, C/D box 116-14)

1. Identity

Alias_symbol (synonym)
General Information
Other alias
HGNC (Hugo) SNORD116-14
LocusID (NCBI) 100033426
Atlas_Id 73868
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 25080141 and ends at 25080234 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

2. DNA/RNA

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

 


3. External links

Nomenclature
HGNC (Hugo)SNORD116-14   33080
Cards
Entrez_Gene (NCBI)SNORD116-14  100033426  small nucleolar RNA, C/D box 116-14
AliasesHBII-85-14
GeneCards (Weizmann)SNORD116-14
Ensembl hg19 (Hinxton)ENSG00000206621 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206621 [Gene_View] &nbspENSG00000206621 [Sequence]  chr15:25080141-25080234 [Contig_View]  SNORD116-14 [Vega]
ICGC DataPortalENSG00000206621
TCGA cBioPortalSNORD116-14
AceView (NCBI)SNORD116-14
Genatlas (Paris)SNORD116-14
WikiGenes100033426
SOURCE (Princeton)SNORD116-14
Genetics Home Reference (NIH)SNORD116-14
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD116-14  -     chr15:25080141-25080234 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD116-14  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD116-14 - 15q11.2 [CytoView hg19]  SNORD116-14 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD116-14 [Mapview hg19]  SNORD116-14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD116-14
Alternative Splicing GalleryENSG00000206621
Gene ExpressionSNORD116-14 [ NCBI-GEO ]   SNORD116-14 [ EBI - ARRAY_EXPRESS ]   SNORD116-14 [ SEEK ]   SNORD116-14 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD116-14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets] &nbsp [Normal Tissue Atlas] &nbsp[carcinoma Classsification] &nbsp[NCI60]
BioGPS (Tissue expression)100033426
GTEX Portal (Tissue expression)SNORD116-14
Human Protein AtlasENSG00000206621-SNORD116-14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD116-14
DMDM Disease mutations100033426
Blocks (Seattle)SNORD116-14
Human Protein Atlas [tissue]ENSG00000206621-SNORD116-14 [tissue]
Protein Interaction databases
FunCoupENSG00000206621
BioGRIDSNORD116-14
STRING (EMBL)SNORD116-14
ZODIACSNORD116-14
Ontologies - Pathways
Huge Navigator SNORD116-14 [HugePedia]
snp3D : Map Gene to Disease100033426
BioCentury BCIQSNORD116-14
ClinGenSNORD116-14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100033426
Chemical/Pharm GKB GenePA162404261
Clinical trialSNORD116-14
Miscellaneous
canSAR (ICR)SNORD116-14 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD116-14
EVEXSNORD116-14
GoPubMedSNORD116-14
iHOPSNORD116-14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:31:29 CEST 2018

For comments and suggestions or contributions, please contact us atlasgeneticsoncology@usal.es.